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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os09g37710.1 Brachypodium distachyon: Bradi4g37150.1
MSU V7 Locus: LOC_Os09g37710 Panicum virgatum:
Family: RWP-RK Sorghum bicolor: Sb02g031970
Chromosome: Chr9 Zea mays: GRMZM2G048582_P01;GRMZM2G053298_P02
5' End: 21740633 Arabidopsis thaliana: AT1G20640.1;AT1G20640.2;AT1G76350.1
3' End: 21735440 Cucumis sativus:
Alternative Splice Products: LOC_Os09g37710.2 Glycine max:
Putative Function: NIN, putative, expressed Medicago truncatula: Medtr5g106690.1
RAP2 Locus: Os09g0549450 Mimulus guttatus:
RAP3 Locus: Os09g0549450 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG206114;AG024261
EST/cDNA: EST NIAS Tos17 KO Line: ND4013_0_702_1A;ND4022_0_702_1A
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA KO Line: 05Z11BC84
TRIM T-DNA FST: EI006699;EI009927;CZ557611
TRIM T-DNA KO Line: M0021807;M0035284;M0063920
Postech T-DNA FST: A06492;A02087;A05786;C06622
Postech T-DNA KO Line: 1B-02636;1B-15142;2A-20278;2A-30277