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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os09g29830.3 Brachypodium distachyon:
MSU V7 Locus: LOC_Os09g29830 Panicum virgatum:
Family: bHLH Sorghum bicolor: Sb02g027430
Chromosome: Chr9 Zea mays: AC233869.1_FGP003
5' End: 18144524 Arabidopsis thaliana: AT1G26260.1;AT1G26260.2;AT1G26260.3;AT1G68920.1;AT1G68920.2;AT1G68920.3
3' End: 18141444 Cucumis sativus: Cucsa.284270.1;Cucsa.284270.2;Cucsa.374330.1;Cucsa.374330.2;Cucsa.374330.3;Cucsa.374330.4
Alternative Splice Products: LOC_Os09g29830.2;LOC_Os09g29830.1 Glycine max: Glyma01g09400.1;Glyma02g13860.1
Putative Function: helix-loop-helix DNA-binding domain containing protein, expressed Medicago truncatula: Medtr8g077090.1
RAP2 Locus: Os09g0474100 Mimulus guttatus: mgf000663m
RAP3 Locus: Os09g0474100 Populus trichocarpa: POPTR_0008s11240.1;POPTR_0010s14600.1
Ricinus communis: 30138.m003881
Vitis vinifera: GSVIVP00021166001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AB156321
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: T23419T
PASA Status: PASA_validated OTL Tos17 FST: CU319523;CU320468;ER893275
Topology OTL Tos17 KO Line: AEYD10;APRC05;AQPB07
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 04Z11GJ75;04Z11GJ79
RMD T-DNA KO Line: 04Z11GJ75;04Z11GJ79
TRIM T-DNA KO Line: M0055062
Postech T-DNA FST: A24256
Postech T-DNA KO Line: 3A-14969