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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os09g29130.1 Brachypodium distachyon: Bradi4g32580.1
MSU V7 Locus: LOC_Os09g29130 Panicum virgatum:
Family: zf-HD Sorghum bicolor: Sb02g027040
Chromosome: Chr9 Zea mays: GRMZM2G346920_P01
5' End: 17705611 Arabidopsis thaliana: AT4G24660.1;AT5G65410.1
3' End: 17703754 Cucumis sativus: Cucsa.104100.1
Alternative Splice Products: Glycine max: Glyma01g03060.1;Glyma02g04550.1;Glyma18g21520.1
Putative Function: ZF-HD protein dimerisation region containing protein, expressed Medicago truncatula: Medtr5g034040.1
RAP2 Locus: Os09g0466400 Mimulus guttatus: mgf022733m;mgf026503m
RAP3 Locus: Os09g0466400 Populus trichocarpa: POPTR_0002s10330.1;POPTR_0005s17620.1
Ricinus communis: 29908.m006226
Vitis vinifera: GSVIVP00015141001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: ET190022
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RdSpm4107_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 03Z11EX78;04Z11JI08;04Z11JI38
RMD T-DNA KO Line: 03Z11EX78;04Z11JI08;04Z11JI38
TRIM T-DNA FST: EI008997;CZ555492;CZ555116;CZ553355
TRIM T-DNA KO Line: M0008378;M0026623;M0027777;M0058838
Postech T-DNA FST: B05662;B05661;B02290;C00218
Postech T-DNA KO Line: 1A-07233;1C-03234;1C-10508