LOC_Os09g28354.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os09g28354.1 Brachypodium distachyon: Bradi4g32130.1
MSU V7 Locus: LOC_Os09g28354 Panicum virgatum:
Family: HSF Sorghum bicolor: Sb02g026590
Chromosome: Chr9 Zea mays: GRMZM2G002131_P01;GRMZM2G139535_P01
5' End: 17228961 Arabidopsis thaliana:
3' End: 17221426 Cucumis sativus: Cucsa.102410.1
Alternative Splice Products: Glycine max: Glyma01g39260.1;Glyma11g06010.1;Glyma17g20070.1
Putative Function: CPuORF39 - conserved peptide uORF-containing transcript, expressed Medicago truncatula: CU571152_18.1;Medtr5g017450.1
RAP2 Locus: Os09g0456800 Mimulus guttatus: mgf004940m
RAP3 Locus: Os09g0456800 Populus trichocarpa:
Ricinus communis:
Vitis vinifera: GSVIVP00019488001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: ED481932;ED481728
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RdSpm1559A_3.1;RdSpm1559_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: ER887058
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: AJXH02
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: EI010300;CZ558582
TRIM T-DNA KO Line: M0039864;M0066511
Postech T-DNA FST: B11716;A17126;A25223;A37205;C10311;C10295;C03531;D05039
Postech T-DNA KO Line: 1A-23404;2B-20591;2C-10498;2C-20004;2D-21481;3A-08640;3A-15755;4A-03992