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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os09g13570.1 Brachypodium distachyon: Bradi4g27720.1
MSU V7 Locus: LOC_Os09g13570 Panicum virgatum:
Family: bZIP Sorghum bicolor: Sb02g020760
Chromosome: Chr9 Zea mays: AC203957.3_FGP004;GRMZM2G092137_P01
5' End: 7873655 Arabidopsis thaliana:
3' End: 7871403 Cucumis sativus: Cucsa.043170.1
Alternative Splice Products: Glycine max:
Putative Function: CPuORF2 - conserved peptide uORF-containing transcript, expressed Medicago truncatula:
RAP2 Locus: Os09g0306400 Mimulus guttatus:
RAP3 Locus: Os09g0306400 Populus trichocarpa: POPTR_0005s12130.1;POPTR_0007s13380.1
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG212566
EST/cDNA: NIAS Tos17 KO Line: NF8035_0_401_1A
PASA Status: PASA_validated OTL Tos17 FST: CU315802;CU317608;CU324846
Topology OTL Tos17 KO Line: AIJF09;AOWD07;ASWG09
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Chloroplast OTL T-DNA KO Line:
RMD T-DNA FST: 04Z11EO85;05Z11CV90
RMD T-DNA KO Line: 04Z11EO85;05Z11CV90
TRIM T-DNA KO Line: M0051684
Postech T-DNA FST: A21637
Postech T-DNA KO Line: 3A-12696