LOC_Os09g01960.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os09g01960.1 Brachypodium distachyon: Bradi4g08220.1
MSU V7 Locus: LOC_Os09g01960 Panicum virgatum:
Family: MYB Sorghum bicolor: Sb02g013010
Chromosome: Chr9 Zea mays: GRMZM2G050550_P01
5' End: 658374 Arabidopsis thaliana: AT2G23290.1;AT3G50060.1;AT4G37260.1;AT5G67300.1
3' End: 656425 Cucumis sativus: Cucsa.073130.1;Cucsa.102710.1;Cucsa.395890.1
Alternative Splice Products: Glycine max: Glyma01g39740.1;Glyma05g21220.1;Glyma11g05550.1
Putative Function: MYB family transcription factor, putative, expressed Medicago truncatula: Medtr5g016440.1
RAP2 Locus: Os09g0106700 Mimulus guttatus: mgf002573m;mgf014089m
RAP3 Locus: Os09g0106700 Populus trichocarpa: POPTR_0002s12410.1;POPTR_0005s18620.1;POPTR_0007s10490.1;POPTR_0014s02260.1
Ricinus communis: 29970.m000987;30170.m013698
Vitis vinifera: GSVIVP00014887001;GSVIVP00019566001;GSVIVP00036657001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL520404
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: AIQF05
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A17506;A34243;A12266;A17505;A21675;A34242;C00015
Postech T-DNA KO Line: 1A-06715;3A-04186;3A-09060;3A-12734;4A-01446