LOC_Os08g42470.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os08g42470.1 Brachypodium distachyon: Bradi3g41510.1;Bradi3g41510.2
MSU V7 Locus: LOC_Os08g42470 Panicum virgatum:
Family: bHLH Sorghum bicolor: Sb07g025920
Chromosome: Chr8 Zea mays: GRMZM2G046493_P01;GRMZM2G046493_P02;GRMZM2G046493_P03
5' End: 26843299 Arabidopsis thaliana: AT5G50915.1;AT5G50915.2
3' End: 26841064 Cucumis sativus: Cucsa.134770.1;Cucsa.134770.2
Alternative Splice Products: Glycine max: Glyma04g37690.1;Glyma05g38450.1;Glyma06g17420.1;Glyma08g01210.1
Putative Function: BEE 1, putative, expressed Medicago truncatula: Medtr4g152040.1
RAP2 Locus: Os08g0536800 Mimulus guttatus: mgf020073m;mgf020423m
RAP3 Locus: Os08g0536800 Populus trichocarpa: POPTR_0012s10670.1;POPTR_0015s11550.1
Ricinus communis: 30147.m014428
Vitis vinifera: GSVIVP00006172001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST:
Predicted Subcellular Localization: Chloroplast OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: CZ553728
TRIM T-DNA KO Line: M0013757
Postech T-DNA FST: A08937;A25469
Postech T-DNA KO Line: 3A-01074;3A-15935