LOC_Os08g40030.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os08g40030.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os08g40030 Panicum virgatum:
Family: NAC Sorghum bicolor: Sb07g027650
Chromosome: Chr8 Zea mays: GRMZM2G430522_P01;GRMZM2G430522_P02;GRMZM2G430522_P03
5' End: 25353753 Arabidopsis thaliana: AT1G76420.1
3' End: 25351524 Cucumis sativus:
Alternative Splice Products: Glycine max:
Putative Function: CUP-SHAPED COTYLEDON3, putative, expressed Medicago truncatula: Medtr3g159900.1
RAP2 Locus: Os08g0511200 Mimulus guttatus:
RAP3 Locus: Os08g0511200 Populus trichocarpa: POPTR_0002s00730.1;POPTR_0005s27720.1
Ricinus communis: 30170.m014236
Vitis vinifera: GSVIVP00002924001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: EST NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: ET190021;ED990021;DX576978
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RGdSpm859A_3.1;RdSpm1886_3.1;RdSpm4291_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: EI008027
TRIM T-DNA KO Line: M0047902
Postech T-DNA FST: A01457;A01458
Postech T-DNA KO Line: 1B-00740