LOC_Os08g03520.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os08g03520.1 Brachypodium distachyon: Bradi2g07090.1
MSU V7 Locus: LOC_Os08g03520 Panicum virgatum:
Family: CSD Sorghum bicolor: Sb06g029650
Chromosome: Chr8 Zea mays: GRMZM2G477917_P01
5' End: 1646004 Arabidopsis thaliana: AT2G21060.1;AT4G38680.1
3' End: 1644811 Cucumis sativus:
Alternative Splice Products: Glycine max: Glyma04g00660.1;Glyma11g11290.1;Glyma12g03470.1
Putative Function: retrotransposon protein, putative, Ty1-copia subclass, expressed Medicago truncatula:
RAP2 Locus: Os08g0129200 Mimulus guttatus: mgf001526m;mgf014458m
RAP3 Locus: Os08g0129200 Populus trichocarpa: POPTR_0004s17840.1;POPTR_0009s13460.1
Ricinus communis: 29908.m006148
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: TE_related NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: C08497
Postech T-DNA KO Line: 1B-20728