LOC_Os08g01780.2

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os08g01780.2 Brachypodium distachyon: Bradi3g13370.1;Bradi3g13370.2
MSU V7 Locus: LOC_Os08g01780 Panicum virgatum:
Family: AUX_IAA Sorghum bicolor: Sb07g000990
Chromosome: Chr8 Zea mays: GRMZM2G059544_P01
5' End: 473512 Arabidopsis thaliana:
3' End: 468150 Cucumis sativus:
Alternative Splice Products: LOC_Os08g01780.1 Glycine max:
Putative Function: OsIAA25 - Auxin-responsive Aux/IAA gene family member, expressed Medicago truncatula:
RAP2 Locus: Os08g0109400 Mimulus guttatus:
RAP3 Locus: Os08g0109400 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AB156632;AB155324;AG212714;AG212082;AG206535;AG205319;AG024304;AG021697;AG021427;AG021392
EST/cDNA: NIAS Tos17 KO Line: NC0061_0_101_1A;NC0107_0_403_1A;NC2736_0_105_1A;ND4022_0_505_1A;ND5015_0_134_1A;NF6834_0_702_1A;NF8540_0_406_1A;T03552T;T25042T;T25337T
PASA Status: OTL Tos17 FST: CU316736;CU326196;CU315122;CU314973
Topology OTL Tos17 KO Line: ARBF01;ARUG04;AUND09;AUWF04
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL519664;CL519663
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: AGVD06;AGVE06
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A31399
Postech T-DNA KO Line: 3A-53025