LOC_Os06g49840.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os06g49840.1 Brachypodium distachyon: Bradi1g35000.1
MSU V7 Locus: LOC_Os06g49840 Panicum virgatum:
Family: MADS Sorghum bicolor: Sb10g029810
Chromosome: Chr6 Zea mays: GRMZM2G139073_P01
5' End: 30177996 Arabidopsis thaliana: AT3G54340.1
3' End: 30173485 Cucumis sativus: Cucsa.342790.1;Cucsa.342790.2
Alternative Splice Products: LOC_Os06g49840.2 Glycine max: Glyma04g02980.1;Glyma06g02990.1
Putative Function: OsMADS16 - MADS-box family gene with MIKCc type-box, expressed Medicago truncatula: Medtr3g154110.1
RAP2 Locus: Os06g0712700 Mimulus guttatus: mgf000046m;mgf015533m
RAP3 Locus: Os06g0712700 Populus trichocarpa: POPTR_0005s12000.1;POPTR_0007s13660.1
Ricinus communis: 29782.m000119
Vitis vinifera: GSVIVP00014506001;GSVIVP00036846001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG210506
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: NF1026_0_701_1A
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 03Z11AK04;04Z11JQ76
RMD T-DNA KO Line: 03Z11AK04;04Z11JQ76
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: B04213
Postech T-DNA KO Line: 1C-06947