LOC_Os06g31100.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os06g31100.1 Brachypodium distachyon: Bradi1g39260.1
MSU V7 Locus: LOC_Os06g31100 Panicum virgatum:
Family: TRAF Sorghum bicolor: Sb10g020060
Chromosome: Chr6 Zea mays: GRMZM2G038691_P01
5' End: 18086700 Arabidopsis thaliana: AT2G46260.1;AT3G61600.1;AT3G61600.2
3' End: 18080929 Cucumis sativus: Cucsa.135870.1;Cucsa.258970.1;Cucsa.258970.2
Alternative Splice Products: Glycine max: Glyma03g41570.1;Glyma07g06700.1;Glyma16g03260.1;Glyma19g44170.1
Putative Function: E1-BTB2 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed Medicago truncatula: AC233577_20.1
RAP2 Locus: Os06g0507400 Mimulus guttatus: mgf006663m;mgf009207m;mgf012752m
RAP3 Locus: Os06g0507400 Populus trichocarpa: POPTR_0001s10190.1;POPTR_0002s16840.1;POPTR_0002s16840.2;POPTR_0002s16840.3;POPTR_0002s16840.4;POPTR_0003s13510.1;POPTR_0014s08940.1
Ricinus communis: 30174.m008694
Vitis vinifera: GSVIVP00002493001;GSVIVP00026970001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: DX576878
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RGdSpm403_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: CZ557825;CZ555273;CZ554987;CZ554983;CZ554975;CZ552977;CZ552964;CZ552950
TRIM T-DNA KO Line: M0006559;M0006604;M0006647;M0026270;M0026291;M0026302;M0027064;M0036270
Postech T-DNA FST: B09263;B14145;A16446
Postech T-DNA KO Line: 1D-2707010;3A-08071;3B-00658