LOC_Os06g12400.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os06g12400.1 Brachypodium distachyon: Bradi2g49760.1;Bradi2g49760.2;Bradi2g49760.3
MSU V7 Locus: LOC_Os06g12400 Panicum virgatum:
Family: HB Sorghum bicolor: Sb09g025810
Chromosome: Chr6 Zea mays: GRMZM2G314546_P01;GRMZM2G351018_P01
5' End: 6734446 Arabidopsis thaliana: AT3G19510.1
3' End: 6725306 Cucumis sativus: Cucsa.108830.1
Alternative Splice Products: Glycine max: Glyma10g40640.1;Glyma20g26700.1
Putative Function: Homeobox domain containing protein, expressed Medicago truncatula:
RAP2 Locus: Os06g0229300 Mimulus guttatus: mgf000895m;mgf002707m
RAP3 Locus: Os06g0229300 Populus trichocarpa: POPTR_0001s30570.1;POPTR_0009s09600.1
Ricinus communis: 28152.m000873
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 05Z11AU09
RMD T-DNA KO Line: 05Z11AU09
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: B04967;A32164;A32112;A32113
Postech T-DNA KO Line: 1C-08802;3A-60569;3A-60616