LOC_Os06g11330.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os06g11330.1 Brachypodium distachyon: Bradi1g45810.1;Bradi1g45810.2;Bradi1g45810.3
MSU V7 Locus: LOC_Os06g11330 Panicum virgatum:
Family: MADS Sorghum bicolor: Sb10g007380
Chromosome: Chr6 Zea mays:
5' End: 5963184 Arabidopsis thaliana:
3' End: 5953593 Cucumis sativus: Cucsa.104010.1;Cucsa.104010.2;Cucsa.104010.3;Cucsa.104010.4;Cucsa.104010.5;Cucsa.104010.6;Cucsa.104010.7;Cucsa.160640.1
Alternative Splice Products: Glycine max:
Putative Function: OsMADS55 - MADS-box family gene with MIKCc type-box, expressed Medicago truncatula: Medtr5g033560.1;Medtr5g033820.1
RAP2 Locus: Os06g0217300 Mimulus guttatus: mgf025830m
RAP3 Locus: Os06g0217300 Populus trichocarpa: POPTR_0002s10580.1;POPTR_0005s17950.1;POPTR_0007s14310.1;POPTR_0007s14310.2
Ricinus communis:
Vitis vinifera: GSVIVP00004864001;GSVIVP00015108001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: EI184215;EI026719;EI026534
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RdSpm2618A_3.1;RdSpm2618B_3.1;RdSpm3036_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Mitochondrion OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: CZ558972
TRIM T-DNA KO Line: M0052443
Postech T-DNA FST: C12375
Postech T-DNA KO Line: 2C-50340