LOC_Os05g48960.2

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os05g48960.2 Brachypodium distachyon: Bradi2g16520.1;Bradi2g16520.2
MSU V7 Locus: LOC_Os05g48960 Panicum virgatum:
Family: C3H Sorghum bicolor: Sb09g028530
Chromosome: Chr5 Zea mays: GRMZM2G020928_P01;GRMZM2G020928_P02;GRMZM2G020928_P03;GRMZM2G025014_P01;GRMZM2G025014_P02;GRMZM2G025014_P03;GRMZM2G025014_P05;GRMZM2G031827_P01;GRMZM2G031827_P02;GRMZM2G031827_P04;GRMZM2G031827_P05;GRMZM2G031827_P06
5' End: 28082963 Arabidopsis thaliana: AT1G27650.1;AT5G42820.1;AT5G42820.2
3' End: 28080212 Cucumis sativus: Cucsa.272480.1
Alternative Splice Products: LOC_Os05g48960.3;LOC_Os05g48960.4;LOC_Os05g48960.1 Glycine max: Glyma07g20090.1;Glyma20g00950.1
Putative Function: splicing factor U2AF, putative, expressed Medicago truncatula: Medtr1g039850.1
RAP2 Locus: Os05g0564200 Mimulus guttatus: mgf001805m
RAP3 Locus: Os05g0564200 Populus trichocarpa: POPTR_0002s00480.1;POPTR_0002s00480.2;POPTR_0002s00480.3;POPTR_0005s27940.1
Ricinus communis: 30170.m013808
Vitis vinifera: GSVIVP00002951001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: EST NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: CZ555542;CZ554867
TRIM T-DNA KO Line: M0025921;M0027976
Postech T-DNA FST: B07483;A31733
Postech T-DNA KO Line: 1D-01320;3A-60180