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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os05g48820.1 Brachypodium distachyon: Bradi2g46230.1
MSU V7 Locus: LOC_Os05g48820 Panicum virgatum:
Family: HB Sorghum bicolor: Sb03g030770
Chromosome: Chr5 Zea mays: GRMZM2G122750_P01;GRMZM2G125294_P01;GRMZM2G125294_P02
5' End: 27986371 Arabidopsis thaliana: AT5G44180.1
3' End: 27975656 Cucumis sativus: Cucsa.046480.1;Cucsa.046480.2
Alternative Splice Products: Glycine max: Glyma07g32180.1;Glyma13g24370.1;Glyma13g30860.1
Putative Function: DDT, putative, expressed Medicago truncatula: Medtr2g018010.1
RAP2 Locus: Os05g0562400 Mimulus guttatus: mgf006635m;mgf006858m
RAP3 Locus: Os05g0562400 Populus trichocarpa: POPTR_0007s01330.1;POPTR_0017s04760.1
Ricinus communis: 29983.m003128
Vitis vinifera: GSVIVP00018645001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 04Z11AM82;04Z11AM83
RMD T-DNA KO Line: 04Z11AM82;04Z11AM83
TRIM T-DNA FST: CZ558458;CZ558457
TRIM T-DNA KO Line: M0039326;M0039327
Postech T-DNA FST: A29353;A13905;A01175;A30309;A05997;C02337
Postech T-DNA KO Line: 1A-20715;1A-25206;2A-20547;3A-05611;3A-51107;3A-51982