LOC_Os05g40260.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os05g40260.1 Brachypodium distachyon: Bradi2g22150.1;Bradi2g22150.2
MSU V7 Locus: LOC_Os05g40260 Panicum virgatum:
Family: GNAT Sorghum bicolor: Sb09g023610
Chromosome: Chr5 Zea mays:
5' End: 23646937 Arabidopsis thaliana: AT1G32070.1;AT1G32070.2;AT1G32070.3
3' End: 23642766 Cucumis sativus: Cucsa.130690.1
Alternative Splice Products: Glycine max: Glyma09g40890.1;Glyma18g44940.1
Putative Function: acetyltransferase, GNAT family, putative, expressed Medicago truncatula: Medtr7g080510.1
RAP2 Locus: Os05g0481000 Mimulus guttatus: mgf005044m;mgf015871m
RAP3 Locus: Os05g0481000 Populus trichocarpa: POPTR_0016s14680.1;POPTR_0016s14680.2;POPTR_0344s00210.1
Ricinus communis: 27955.m000374
Vitis vinifera: GSVIVP00033654001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG206867
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: ND6038_0_701_1A
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST:
Predicted Subcellular Localization: Chloroplast OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A03728;A07726;A07727
Postech T-DNA KO Line: 1B-23631;2A-80052;2A-80054