LOC_Os05g39950.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os05g39950.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os05g39950 Panicum virgatum:
Family: OFP Sorghum bicolor:
Chromosome: Chr5 Zea mays: GRMZM2G026927_P01
5' End: 23478850 Arabidopsis thaliana: AT1G06920.1;AT2G30400.1
3' End: 23477065 Cucumis sativus: Cucsa.130460.1;Cucsa.176910.1
Alternative Splice Products: Glycine max: Glyma01g32440.1;Glyma02g40190.1;Glyma03g04470.1;Glyma09g41280.1;Glyma11g26200.1;Glyma14g38380.1;Glyma18g06090.1;Glyma18g44780.1
Putative Function: DUF623 domain containing protein, expressed Medicago truncatula: Medtr5g083050.1
RAP2 Locus: Os05g0477200 Mimulus guttatus: mgf017663m
RAP3 Locus: Os05g0477200 Populus trichocarpa: POPTR_0006s10820.1;POPTR_0013s15120.1;POPTR_0016s14170.1;POPTR_0019s14900.1
Ricinus communis: 27918.m000042;29804.m001480
Vitis vinifera: GSVIVP00023952001;GSVIVP00037475001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL519655
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: AGUA12
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: C06536
Postech T-DNA KO Line: 1B-14838