LOC_Os05g34780.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os05g34780.1 Brachypodium distachyon: Bradi2g25020.1
MSU V7 Locus: LOC_Os05g34780 Panicum virgatum:
Family: SWI_SNF-BAF60b Sorghum bicolor:
Chromosome: Chr5 Zea mays:
5' End: 20643355 Arabidopsis thaliana: AT5G63700.1
3' End: 20636382 Cucumis sativus: Cucsa.114290.1
Alternative Splice Products: Glycine max: Glyma11g33020.1
Putative Function: retrotransposon protein, putative, Ty3-gypsy subclass, expressed Medicago truncatula:
RAP2 Locus: Os05g0421000 Mimulus guttatus: mgf017439m
RAP3 Locus: Populus trichocarpa:
Ricinus communis: 29685.m000501
Vitis vinifera: GSVIVP00035317001
Sequence Quality Mutant Information
TE-related: TE_related NIAS Tos17 FST:
EST/cDNA: EST NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Mitochondrion OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: CZ558062
TRIM T-DNA KO Line: M0037445
Postech T-DNA FST: A33884
Postech T-DNA KO Line: 4A-01134