LOC_Os05g27880.2

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os05g27880.2 Brachypodium distachyon: Bradi1g52450.1;Bradi1g52450.2
MSU V7 Locus: LOC_Os05g27880 Panicum virgatum:
Family: TRAF Sorghum bicolor: Sb10g000240
Chromosome: Chr5 Zea mays:
5' End: 16273966 Arabidopsis thaliana: AT2G30600.1;AT2G30600.2;AT2G30600.3;AT2G30600.4
3' End: 16267416 Cucumis sativus: Cucsa.272090.1;Cucsa.272090.2
Alternative Splice Products: LOC_Os05g27880.3;LOC_Os05g27880.1 Glycine max: Glyma14g39820.1
Putative Function: BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed Medicago truncatula: Medtr5g075660.1
RAP2 Locus: Os05g0345500 Mimulus guttatus: mgf009466m
RAP3 Locus: Os05g0345500 Populus trichocarpa: POPTR_0002s01110.1;POPTR_0005s27270.1
Ricinus communis: 30170.m014361
Vitis vinifera: GSVIVP00002879001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: EST NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A12799;D08468
Postech T-DNA KO Line: 2D-41313;3A-04674