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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g55970.2 Brachypodium distachyon: Bradi5g24360.1
MSU V7 Locus: LOC_Os04g55970 Panicum virgatum:
Family: AP2-EREBP Sorghum bicolor: Sb06g031120
Chromosome: Chr4 Zea mays: GRMZM2G086573_P01
5' End: 33346562 Arabidopsis thaliana: AT5G57390.1
3' End: 33341978 Cucumis sativus: Cucsa.092550.1
Alternative Splice Products: LOC_Os04g55970.1 Glycine max: Glyma13g00950.1;Glyma17g07010.1
Putative Function: AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed Medicago truncatula: Medtr8g129150.1
RAP2 Locus: Os04g0653600 Mimulus guttatus: mgf025366m
RAP3 Locus: Os04g0653600 Populus trichocarpa: POPTR_0006s18330.1;POPTR_0006s18330.2;POPTR_0018s09900.1
Ricinus communis: 29763.m000186
Vitis vinifera: GSVIVP00031356001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: EI026779
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RdSpm2213A_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 05Z11FH51;05Z11FH62
RMD T-DNA KO Line: 05Z11FH51;05Z11FH62
TRIM T-DNA KO Line: M0000856
Postech T-DNA FST: A27825;A01197;A02751;D08524;D08525
Postech T-DNA KO Line: 1A-25260;1B-04728;2D-41371;3A-18004