LOC_Os04g54474.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g54474.1 Brachypodium distachyon: Bradi5g23340.1
MSU V7 Locus: LOC_Os04g54474 Panicum virgatum:
Family: bZIP Sorghum bicolor:
Chromosome: Chr4 Zea mays: GRMZM2G131961_P01;GRMZM2G131961_P02;GRMZM2G131961_P03;GRMZM2G131961_P04;GRMZM2G131961_P05;GRMZM2G445575_P01;GRMZM2G445575_P02;GRMZM2G445575_P03;GRMZM2G445575_P04
5' End: 32412065 Arabidopsis thaliana: AT1G22070.1;AT5G10030.1;AT5G65210.1;AT5G65210.2;AT5G65210.3;AT5G65210.4;AT5G65210.5;AT5G65210.6
3' End: 32403336 Cucumis sativus: Cucsa.201510.1;Cucsa.201510.2;Cucsa.201510.3;Cucsa.201510.4;Cucsa.201510.5;Cucsa.201510.6;Cucsa.201510.7
Alternative Splice Products: LOC_Os04g54474.3;LOC_Os04g54474.2 Glycine max: Glyma05g31620.1;Glyma08g14840.1;Glyma11g36010.1;Glyma18g02430.1
Putative Function: transcription factor, putative, expressed Medicago truncatula: Medtr3g100900.1;Medtr4g140620.1;Medtr8g042620.1
RAP2 Locus: Os04g0637000 Mimulus guttatus: mgf012210m;mgf016500m
RAP3 Locus: Os04g0637000 Populus trichocarpa: POPTR_0002s09130.1;POPTR_0005s08370.1;POPTR_0005s16400.1;POPTR_0007s06180.1
Ricinus communis: 29908.m005962
Vitis vinifera: GSVIVP00015295001;GSVIVP00019423001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AB157632;AB157630;AG213462;AG020844
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: H0155_5_104_1A;T09030T;T29187T;T29190T
PASA Status: PASA_validated OTL Tos17 FST: CU324757
Topology OTL Tos17 KO Line: AIMC01
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: B00067;A10533
Postech T-DNA KO Line: 1A-17110;3A-02537