LOC_Os04g53720.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g53720.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os04g53720 Panicum virgatum:
Family: SNF2 Sorghum bicolor: Sb06g029476
Chromosome: Chr4 Zea mays:
5' End: 32016407 Arabidopsis thaliana: AT1G50410.1;AT3G20010.1
3' End: 32009476 Cucumis sativus:
Alternative Splice Products: Glycine max: Glyma10g43430.1;Glyma20g23390.1
Putative Function: SNF2 family N-terminal domain containing protein, expressed Medicago truncatula:
RAP2 Locus: Os04g0629300 Mimulus guttatus: mgf005230m
RAP3 Locus: Os04g0629300 Populus trichocarpa:
Ricinus communis: 30131.m007270
Vitis vinifera: GSVIVP00002586001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG205803;AG212574;AG210847;AG210129;AG209770;AG208429;AG207581;AG207577;AG024292;AG024116;AG023339;AG021336;AG021185
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: H0738_2_105_1A;NC0031_0_404_1A;ND0026_0_405_1A;ND0035_0_701_1A;ND3044_0_704_1A;ND4020_0_101_1A;ND9010_0_703_1A;ND9012_0_403_1A;NE3024_0_402_1A;NE8028_0_404_1A;NE9043_0_405_1A;NF2761_0_401_1A;NF8039_0_101_1A
PASA Status: PASA_validated OTL Tos17 FST: CU323725;CU319643;CU316603;CU316580;CU319456;CU319222;CU318563;CU315522;CU318318;CU315113;CU314659;CU317523;CU325293;CU321195;CU321003;CU314338;CU320864;CU313738;CU323827;CU323778;CU319956
Topology OTL Tos17 KO Line: AHPC04;AJOD06;AJSD11;AJWB09;ANID03;ANLH03;AODE08;AONB09;AOSA08;APND07;AQIG04;AQNH12;ARIC03;ARYH03;ASBH06;ASVA02;ATBH05;ATFG07;ATLA05;AUZC12;AVGC08
Transmembrane Domain (TM): 0 UCD Ds FST: DU168645;CZ167776;CZ168164;CZ167789;CZ167781
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RDs1205_5.1;RDs1206_5.1;RDs1214_5.1;RGT128_5.1;RGT3455_5.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 04Z11AI07
RMD T-DNA KO Line: 04Z11AI07
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: C10140;D11651
Postech T-DNA KO Line: 2C-10375;3D-02662