LOC_Os04g51070.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g51070.1 Brachypodium distachyon: Bradi5g20400.1
MSU V7 Locus: LOC_Os04g51070 Panicum virgatum: 12750.m00007
Family: bHLH Sorghum bicolor: Sb04g030850
Chromosome: Chr4 Zea mays: AC233960.1_FGP005
5' End: 30238854 Arabidopsis thaliana: AT1G06170.1;AT1G06170.2;AT2G31210.1;AT2G31220.1
3' End: 30235323 Cucumis sativus: Cucsa.265990.1
Alternative Splice Products: Glycine max: Glyma05g26490.1;Glyma08g09420.1
Putative Function: helix-loop-helix DNA-binding domain containing protein, expressed Medicago truncatula: AC235671_14.1;AC235671_17.1
RAP2 Locus: Os04g0599300 Mimulus guttatus: mgf004047m;mgf012046m
RAP3 Locus: Os04g0599300 Populus trichocarpa: POPTR_0006s21660.1;POPTR_0016s06900.1
Ricinus communis: 28567.m000052
Vitis vinifera: GSVIVP00002419001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AB155037;AB157793;AB157385;AB156951;AB156600;AB156453;AB156224;AB156204;AG214989;AG214133;AG214101;AG213765;AG213578;AG211989;AG209684;AG209103;AG206829;AG025611;AG025572;AG025398;AG024564;AG023138;AG022320;AG020805
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: H0120_1_205_1A;NC0573_0_302_1A;NC2735_0_702_1A;ND6026_0_503_1A;NE5014_0_105_1A;NE8004_0_503_1A;NF6810_0_103_1A;T00144T;T07236T;T08058T;T08276T;T09848T;T10948T;T12565T;T12739T;T17618T;T22872T;T23035T;T24003T;T24929T;T26603T;T28296T;T29835T;T31729T
PASA Status: PASA_validated OTL Tos17 FST: CU323635;CU316556;CU319583;CU322886;CU315928;CU315464;CU315435;CU325998;CU322150;CU325838;CU321793;CU317873;CU315024;CU325392;CU314685;CU314556;CU325355;CU325181;CU325158;CU317329;CU324888;CU324825;CU324784;CU316898;CU313945;CU320424;CU324295;CU323984;ER893673;ER893166
Topology OTL Tos17 KO Line: ADQF06;AFDE06;AFUB09;AHAB07;AHIB12;AHTC10;AHWD07;AIED02;AIMF06;AIOF06;AIVH08;AJTC11;AKEG01;AKPE10;ALSF11;AMEB01;APCF01;APXE11;AQOC12;AREC08;ARLH05;ARNH10;ARYF12;ASLB11;ATCB03;AUNE04;AUZA07;AUZC10;AVCG06;AVVA04
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 04Z11EN09;04Z11EN50-2;04Z11IE09
RMD T-DNA KO Line: 04Z11EN09;04Z11EN50-2;04Z11IE09
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A10222
Postech T-DNA KO Line: 3A-02296