LOC_Os04g47080.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g47080.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os04g47080 Panicum virgatum:
Family: bHLH Sorghum bicolor: Sb06g016380;Sb06g025020;Sb06g025060
Chromosome: Chr4 Zea mays: AF466202.2_FGP004;GRMZM2G172795_P01
5' End: 27955640 Arabidopsis thaliana: AT1G63650.1;AT1G63650.2;AT5G41315.1
3' End: 27949384 Cucumis sativus: Cucsa.135510.1;Cucsa.135510.2
Alternative Splice Products: Glycine max: Glyma03g01180.1;Glyma05g37770.1;Glyma07g07740.1;Glyma08g01810.1
Putative Function: anthocyanin regulatory Lc protein, putative, expressed Medicago truncatula: Medtr1g086480.1
RAP2 Locus: Os04g0557800 Mimulus guttatus: mgf005803m
RAP3 Locus: Os04g0556800 Populus trichocarpa: POPTR_0001s09450.1;POPTR_0002s16080.1;POPTR_0003s12810.1;POPTR_0014s07960.1
Ricinus communis: 30174.m009029
Vitis vinifera: GSVIVP00000427001;GSVIVP00026866001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: EI183804;EI026620
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RdSpm2323A_3.1;RdSpm2718_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Mitochondrion OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A21802;A22266;A07842;A22267;D03317
Postech T-DNA KO Line: 2D-11049;3A-00065;3A-12844;3A-13262