LOC_Os04g46440.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g46440.1 Brachypodium distachyon: Bradi5g17640.1
MSU V7 Locus: LOC_Os04g46440 Panicum virgatum:
Family: AP2-EREBP Sorghum bicolor:
Chromosome: Chr4 Zea mays: GRMZM2G172936_P01
5' End: 27540929 Arabidopsis thaliana:
3' End: 27539878 Cucumis sativus:
Alternative Splice Products: Glycine max: Glyma05g04920.1;Glyma11g03790.1;Glyma17g15310.1
Putative Function: AP2 domain containing protein, expressed Medicago truncatula:
RAP2 Locus: Os04g0550200 Mimulus guttatus: mgf019024m;mgf022802m
RAP3 Locus: Os04g0550200 Populus trichocarpa: POPTR_0002s14210.1;POPTR_0014s05500.1
Ricinus communis: 30174.m008790
Vitis vinifera: GSVIVP00009518001;GSVIVP00009519001;GSVIVP00013482001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST:
Predicted Subcellular Localization: Chloroplast OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: EI009756
TRIM T-DNA KO Line: M0063217
Postech T-DNA FST: A24345;C04710;C01290
Postech T-DNA KO Line: 1A-13926;1B-09516;3A-15045