LOC_Os04g02140.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g02140.1 Brachypodium distachyon: Bradi5g01920.1
MSU V7 Locus: LOC_Os04g02140 Panicum virgatum:
Family: E2F-DP Sorghum bicolor: Sb06g000890
Chromosome: Chr4 Zea mays: GRMZM2G050590_P01
5' End: 711491 Arabidopsis thaliana:
3' End: 706797 Cucumis sativus:
Alternative Splice Products: Glycine max:
Putative Function: transposon protein, putative, CACTA, En/Spm sub-class, expressed Medicago truncatula:
RAP2 Locus: Os04g0112200 Mimulus guttatus:
RAP3 Locus: Os04g0111301 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: TE_related NIAS Tos17 FST:
EST/cDNA: EST NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST:
Predicted Subcellular Localization: Chloroplast OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A16520;A37288
Postech T-DNA KO Line: 3A-08135;4A-04067