LOC_Os03g47740.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os03g47740.1 Brachypodium distachyon: Bradi1g12510.1
MSU V7 Locus: LOC_Os03g47740 Panicum virgatum:
Family: HB Sorghum bicolor: Sb01g011960
Chromosome: Chr3 Zea mays: GRMZM2G011588_P01;GRMZM2G011588_P03;GRMZM2G148098_P01
5' End: 27063684 Arabidopsis thaliana: AT2G16400.1;AT4G34610.1;AT4G34610.2
3' End: 27057031 Cucumis sativus: Cucsa.109320.1;Cucsa.109320.2
Alternative Splice Products: LOC_Os03g47740.3;LOC_Os03g47740.2 Glycine max: Glyma04g01150.1;Glyma04g03150.1;Glyma06g01190.1;Glyma06g03200.1;Glyma14g07710.1;Glyma17g37260.1
Putative Function: homeodomain protein, putative, expressed Medicago truncatula: Medtr1g028710.1
RAP2 Locus: Os03g0680800 Mimulus guttatus: mgf013801m
RAP3 Locus: Os03g0680800 Populus trichocarpa: POPTR_0004s16660.1;POPTR_0009s12360.1
Ricinus communis: 30131.m007089;30170.m014098
Vitis vinifera: GSVIVP00014546001;GSVIVP00035919001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG212631;AG210889
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: NF2795_0_532_1A;NF8512_0_701_1A
PASA Status: PASA_validated OTL Tos17 FST: CU318266;CU325950;CU321831;CU314832;CU316913;CU313413;ER893379
Topology OTL Tos17 KO Line: ADED12;AFID07;ALYG03;AOJB05;ARTA10;ATIE10;AUYC08
Transmembrane Domain (TM): 0 UCD Ds FST: CZ593634
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RDs1676_5.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A20540;A20541;A20539;C00871;C00869;C00870;C11209
Postech T-DNA KO Line: 1A-09127;2C-30324;3A-11738