LOC_Os03g07880.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os03g07880.1 Brachypodium distachyon: Bradi1g72960.1
MSU V7 Locus: LOC_Os03g07880 Panicum virgatum:
Family: CCAAT Sorghum bicolor: Sb01g045500
Chromosome: Chr3 Zea mays: GRMZM2G000686_P01;GRMZM2G000686_P02;GRMZM2G000686_P03;GRMZM2G000686_P04;GRMZM2G000686_P05;GRMZM2G000686_P06;GRMZM2G000686_P10
5' End: 4005428 Arabidopsis thaliana: AT1G54160.1;AT3G14020.1
3' End: 4001995 Cucumis sativus:
Alternative Splice Products: LOC_Os03g07880.2;LOC_Os03g07880.3 Glycine max: Glyma13g16770.1;Glyma17g05920.1
Putative Function: nuclear transcription factor Y subunit, putative, expressed Medicago truncatula: Medtr2g120660.1;Medtr2g120660.2
RAP2 Locus: Os03g0174900 Mimulus guttatus: mgf004929m
RAP3 Locus: Os03g0174900 Populus trichocarpa: POPTR_0006s14740.1;POPTR_0018s07220.1
Ricinus communis: 29706.m001307;29912.m005288
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 04Z11NL90
RMD T-DNA KO Line: 04Z11NL90
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: C06927;C07284
Postech T-DNA KO Line: 1B-16114;1B-17117