LOC_Os02g02820.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os02g02820.1 Brachypodium distachyon: Bradi3g01900.1;Bradi3g01910.1
MSU V7 Locus: LOC_Os02g02820 Panicum virgatum:
Family: bHLH Sorghum bicolor: Sb04g001650
Chromosome: Chr2 Zea mays: GRMZM2G139372_P01;GRMZM2G139372_P02;GRMZM2G139372_P03;GRMZM2G139372_P04;GRMZM2G139372_P05;GRMZM2G139372_P06;GRMZM2G139372_P07
5' End: 1076776 Arabidopsis thaliana: AT2G16910.1
3' End: 1073551 Cucumis sativus: Cucsa.010660.1
Alternative Splice Products: Glycine max: Glyma10g42830.1;Glyma20g24170.1
Putative Function: helix-loop-helix DNA-binding domain containing protein, expressed Medicago truncatula:
RAP2 Locus: Os02g0120500 Mimulus guttatus: mgf026193m
RAP3 Locus: Os02g0119900 Populus trichocarpa: POPTR_0009s13860.1
Ricinus communis: 29869.m001184;29869.m001185;29869.m001189
Vitis vinifera: GSVIVP00002687001;GSVIVP00036135001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG024808
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: T02610T
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A17157;A17159
Postech T-DNA KO Line: 3A-08673;3A-08675