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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os02g01355.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os02g01355 Panicum virgatum:
Family: MADS Sorghum bicolor: Sb04g000500
Chromosome: Chr2 Zea mays:
5' End: 204616 Arabidopsis thaliana:
3' End: 199224 Cucumis sativus:
Alternative Splice Products: Glycine max:
Putative Function: MADS-box transcription factor, putative, expressed Medicago truncatula:
RAP2 Locus: Mimulus guttatus: mgf001038m;mgf007062m
RAP3 Locus: Os02g0104100 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: EI027112
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RdSpm2405_3.1
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST: CL517693;CL517692
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: ABPD03
RMD T-DNA FST: 04Z11GO25;04Z11GO28;04Z11GO32;04Z11GO43;04Z11GO47;04Z11GO50;04Z11GO58;04Z11GO63;04Z11GO65;04Z11GO74;04Z11GO94
RMD T-DNA KO Line: 04Z11GO25;04Z11GO28;04Z11GO32;04Z11GO43;04Z11GO47;04Z11GO50;04Z11GO58;04Z11GO63;04Z11GO65;04Z11GO74;04Z11GO94
TRIM T-DNA KO Line: M0054532
Postech T-DNA FST: A07752;C11032
Postech T-DNA KO Line: 2C-30176;3A-00008