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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g68370.1 Brachypodium distachyon: Bradi2g58390.1
MSU V7 Locus: LOC_Os01g68370 Panicum virgatum:
Family: ABI3VP1 Sorghum bicolor: Sb03g043480
Chromosome: Chr1 Zea mays: GRMZM2G133398_P01;GRMZM2G133398_P02
5' End: 39726988 Arabidopsis thaliana: AT3G24650.1
3' End: 39723155 Cucumis sativus: Cucsa.078480.1
Alternative Splice Products: LOC_Os01g68370.3;LOC_Os01g68370.2;LOC_Os01g68370.4 Glycine max: Glyma08g47240.1;Glyma18g38490.1
Putative Function: B3 DNA binding domain containing protein, expressed Medicago truncatula:
RAP2 Locus: Os01g0911700 Mimulus guttatus: mgf023017m
RAP3 Locus: Os01g0911700 Populus trichocarpa: POPTR_0002s25330.1
Ricinus communis: 30204.m001803
Vitis vinifera: GSVIVP00001240001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: ER936359;ER936205;ER936172
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RdSpm3113_3.1;RdSpm3118A_3.1;RdSpm3118B_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 03Z11EB22;03Z11EB57-2;03Z11EB71
RMD T-DNA KO Line: 03Z11EB22;03Z11EB57-2;03Z11EB71
TRIM T-DNA KO Line: M0030628
Postech T-DNA FST: B09298;B07236;A12291;A03631;A12148;A12292;C13506;D04755;D06510
Postech T-DNA KO Line: 1B-23229;1C-15417;1D-2707049;2D-21215;2D-31221;3A-04067;3A-04211;3C-00444