LOC_Os01g65850.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g65850.1 Brachypodium distachyon: Bradi2g56870.1
MSU V7 Locus: LOC_Os01g65850 Panicum virgatum:
Family: SNF2 Sorghum bicolor: Sb03g041720
Chromosome: Chr1 Zea mays:
5' End: 38237228 Arabidopsis thaliana:
3' End: 38228812 Cucumis sativus:
Alternative Splice Products: Glycine max:
Putative Function: CHD3-type chromatin-remodeling factor PICKLE, putative, expressed Medicago truncatula:
RAP2 Locus: Os01g0881000 Mimulus guttatus:
RAP3 Locus: Os01g0881000 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG214967;AG205386;AB157219;AB157134;AB156812;AB156330;AB156057;AB155897;AB155860;AB155842;AB155479;AB155331;AG214894;AG214653;AG214233;AG213424;AG213193;AG212865;AG211973;AG211306;AG211179;AG210005;AG207337;AG025352;AG025144;AG024998;AG023929;AG023689;AG023430;AG023157;AG021774;AG021768
EST/cDNA: NIAS Tos17 KO Line: NC0253_0_401_1A;NC2513_0_102_1A;NC2752_0_104_1A;ND0059_0_404_1A;ND1061_0_101_1A;ND2059_0_501_1A;ND8004_0_403_1A;NE9004_0_402_1A;NF3724_0_502_1A;NF4019_0_101_1A;NF6805_0_703_1A;NF9024_0_102_1A;T02101T;T02106T;T04242T;T05418T;T07056T;T09185T;T13233T;T15682T;T17089T;T17509T;T18428T;T20935T;T21016T;T21172T;T22028T;T23475T;T25813T;T25981T;T27332T;T27814T
PASA Status: OTL Tos17 FST: CU323617;CU323565;CU323345;CU319537;CU319284;CU322806;CU322490;CU315390;CU315286;CU325763;CU314446;CU325084;CU314321;CU314031;CU313906;CU324038;CU313339;CU320152
Topology OTL Tos17 KO Line: AGFF09;AHWD01;AJIA08;AJWF06;AJXH02;AKGB11;AKOF11;ALEC06;APLC03;AQEA01;AQUC02;ATLC08;AULC10;AULD03;AVAH07;AVGA03;AVNA05;AVQH02
Transmembrane Domain (TM): 0 UCD Ds FST: ET030174;ET030161;ET025900;ET025870;ET025751;ET025708;ET025618;ET025615;ET025545;ET025538;ET025482;ET025464;ET025410;ET025361;ET025352;ET025311;ET025309;ET025280;ET025273;ET025234;ET025230;ET025203;ET025145;ET025140;ET025139;ET025099;DU169032;DU133734
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RGT2913_5.1;RGT3636_5.1;RGT6118A_5.1;RGT6120C_5.1;RGT6120D_5.1;RdSpm3160A_3.2;RdSpm3219_3.1;RdSpm3457A_3.1;RdSpm3458B_3.1;RdSpm3460_3.1;RdSpm3462A_3.1;RdSpm3462B_3.1;RdSpm3462C_3.1;RdSpm3462D_3.1;RdSpm3462_3.1;RdSpm3464D_3.1;RdSpm3464_3.1;RdSpm3527_3.1;RdSpm3580B_3.1;RdSpm3586_3.1;RdSpm3587_3.1;RdSpm3588_3.1;RdSpm3594A_3.1;RdSpm3596C_3.1;RdSpm3596D_3.1;RdSpm3597B_3.1;RdSpm3663A_3.1;RdSpm3695_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL523981;CL520318;CL520317
Predicted Subcellular Localization: Mitochondrion OTL T-DNA KO Line: AIKB06;AMWE06
RMD T-DNA FST: 03Z11DG64;03Z11DG77;03Z11DY90;03Z11DY90-2;03Z11EX49;03Z11EX49-2
RMD T-DNA KO Line: 03Z11DG64;03Z11DG77;03Z11DY90;03Z11DY90-2;03Z11EX49;03Z11EX49-2
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST:
Postech T-DNA KO Line: