LOC_Os01g53880.6

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g53880.6 Brachypodium distachyon: Bradi2g49420.1;Bradi2g49420.2;Bradi2g49420.3;Bradi2g49420.4;Bradi2g49420.5;Bradi2g49420.6;Bradi2g49420.7
MSU V7 Locus: LOC_Os01g53880 Panicum virgatum:
Family: AUX_IAA Sorghum bicolor: Sb03g034170
Chromosome: Chr1 Zea mays: GRMZM2G057067_P01;GRMZM2G057067_P02;GRMZM2G057067_P03;GRMZM2G057067_P04
5' End: 30979770 Arabidopsis thaliana:
3' End: 30975765 Cucumis sativus: Cucsa.278520.1;Cucsa.278520.2;Cucsa.278520.3
Alternative Splice Products: LOC_Os01g53880.2;LOC_Os01g53880.5;LOC_Os01g53880.1;LOC_Os01g53880.4;LOC_Os01g53880.3;LOC_Os01g53880.7 Glycine max: Glyma07g01800.1;Glyma08g21460.1;Glyma13g43050.1;Glyma15g02350.1
Putative Function: OsIAA6 - Auxin-responsive Aux/IAA gene family member, expressed Medicago truncatula: Medtr2g122050.1;Medtr8g016050.1
RAP2 Locus: Os01g0741900 Mimulus guttatus: mgf001630m;mgf003826m;mgf012156m
RAP3 Locus: Os01g0741900 Populus trichocarpa: POPTR_0001s19120.1;POPTR_0001s19120.2;POPTR_0003s04650.1
Ricinus communis: 30146.m003502
Vitis vinifera: GSVIVP00032097001;GSVIVP00034294001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: EST NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST:
Postech T-DNA KO Line: