LOC_Os01g48444.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g48444.1 Brachypodium distachyon: Bradi2g46420.1;Bradi2g46420.2
MSU V7 Locus: LOC_Os01g48444 Panicum virgatum:
Family: AUX_IAA Sorghum bicolor: Sb03g030995
Chromosome: Chr1 Zea mays: GRMZM2G037368_P01;GRMZM2G163848_P01;GRMZM2G163848_P02;GRMZM2G163848_P03;GRMZM2G163848_P04;GRMZM2G163848_P05;GRMZM2G163848_P06;GRMZM2G163848_P07
5' End: 27780978 Arabidopsis thaliana:
3' End: 27777506 Cucumis sativus: Cucsa.103730.1;Cucsa.103730.2;Cucsa.103730.3;Cucsa.160870.1;Cucsa.160870.2;Cucsa.160870.3;Cucsa.160870.4;Cucsa.160870.5;Cucsa.160870.6;Cucsa.160870.7;Cucsa.160870.8;Cucsa.359310.1
Alternative Splice Products: Glycine max:
Putative Function: OsIAA5 - Auxin-responsive Aux/IAA gene family member, expressed Medicago truncatula:
RAP2 Locus: Os01g0675700 Mimulus guttatus:
RAP3 Locus: Os01g0675700 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: FI852957
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RGT6455_5.1
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST:
Predicted Subcellular Localization: Chloroplast OTL T-DNA KO Line:
RMD T-DNA FST: 04Z11FI11
RMD T-DNA KO Line: 04Z11FI11
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: B07455
Postech T-DNA KO Line: 1C-16220