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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g45570.1 Brachypodium distachyon: Bradi2g45000.1
MSU V7 Locus: LOC_Os01g45570 Panicum virgatum:
Family: HB Sorghum bicolor: Sb03g029330
Chromosome: Chr1 Zea mays: GRMZM2G126239_P01
5' End: 25883718 Arabidopsis thaliana: AT2G01430.1
3' End: 25880204 Cucumis sativus: Cucsa.280560.1
Alternative Splice Products: Glycine max: Glyma07g34230.1;Glyma20g01770.1
Putative Function: homeobox associated leucine zipper, putative, expressed Medicago truncatula:
RAP2 Locus: Os01g0643600 Mimulus guttatus: mgf026123m
RAP3 Locus: Os01g0643600 Populus trichocarpa: POPTR_0008s12840.1;POPTR_0010s12300.1
Ricinus communis: 29816.m000678
Vitis vinifera: GSVIVP00030483001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: FI854770;ED552159
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RdSpm1763B_3.1;RdSpm6097L_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL522374;CL522373;CL518872;ER888461;ER887314;ER887313;ER891662;ER891661
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: AFCA02;AFCG02;ALFC12;ALPE09
RMD T-DNA KO Line: 05Z11DL70
TRIM T-DNA FST: EI007534;EI007487;EI010038
TRIM T-DNA KO Line: M0041699;M0042968;M0064435
Postech T-DNA FST: B10469;B07855;B10468;A37185
Postech T-DNA KO Line: 1D-02254;2B-00027;4A-03977