LOC_Os01g01870.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g01870.1 Brachypodium distachyon: Bradi2g00740.1
MSU V7 Locus: LOC_Os01g01870 Panicum virgatum:
Family: bHLH Sorghum bicolor: Sb03g008560
Chromosome: Chr1 Zea mays: GRMZM2G112629_P01
5' End: 481166 Arabidopsis thaliana: AT1G10585.1;AT1G10586.1;AT1G10586.2
3' End: 478325 Cucumis sativus: Cucsa.098370.1
Alternative Splice Products: Glycine max: Glyma04g35380.1;Glyma05g02110.1;Glyma06g19490.1;Glyma17g09810.1
Putative Function: helix-loop-helix DNA-binding domain containing protein, expressed Medicago truncatula: Medtr2g017430.1;Medtr4g108040.1;Medtr4g108270.1
RAP2 Locus: Os01g0108600 Mimulus guttatus: mgf000417m
RAP3 Locus: Os01g0108600 Populus trichocarpa: POPTR_0012s08050.1;POPTR_0015s08580.1
Ricinus communis: 30147.m013968
Vitis vinifera: GSVIVP00013072001;GSVIVP00016111001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG024349
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: ND4034_0_502_1A
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST:
Predicted Subcellular Localization: Chloroplast OTL T-DNA KO Line:
RMD T-DNA FST: 05Z11BR45
RMD T-DNA KO Line: 05Z11BR45
TRIM T-DNA FST: EI008113
TRIM T-DNA KO Line: M0003712
Postech T-DNA FST: A06932;A35691;A29343
Postech T-DNA KO Line: 2A-40229;3A-51101;4A-02671