LOC_Os01g01840.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g01840.1 Brachypodium distachyon: Bradi2g00720.1;Bradi2g00730.1
MSU V7 Locus: LOC_Os01g01840 Panicum virgatum:
Family: bHLH Sorghum bicolor: Sb03g008570
Chromosome: Chr1 Zea mays: GRMZM2G169947_P01
5' End: 460716 Arabidopsis thaliana: AT1G10585.1;AT1G10586.1;AT1G10586.2
3' End: 455512 Cucumis sativus: Cucsa.098370.1
Alternative Splice Products: Glycine max:
Putative Function: helix-loop-helix DNA-binding domain containing protein, expressed Medicago truncatula: Medtr2g017430.1;Medtr4g108040.1;Medtr4g108270.1
RAP2 Locus: Os01g0108400 Mimulus guttatus: mgf000417m
RAP3 Locus: Os01g0108400 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: EST NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: FI853219;FI853218;CZ167974
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RdSpm342B_3.1;RdSpm4869D_3.1;RdSpm4872_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Chloroplast OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: CZ552895;CZ552894
TRIM T-DNA KO Line: M0006341;M0006342
Postech T-DNA FST: B05622;C06169
Postech T-DNA KO Line: 1B-13626;1C-10418