LOC_Os01g01312.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g01312.1 Brachypodium distachyon: Bradi2g03620.1
MSU V7 Locus: LOC_Os01g01312 Panicum virgatum:
Family: SNF2 Sorghum bicolor: Sb03g009030
Chromosome: Chr1 Zea mays: GRMZM2G070264_P01
5' End: 156500 Arabidopsis thaliana: AT2G18760.1
3' End: 151409 Cucumis sativus: Cucsa.324200.1;Cucsa.324200.2
Alternative Splice Products: Glycine max: Glyma13g18650.1
Putative Function: retrotransposon protein, putative, Ty1-copia subclass, expressed Medicago truncatula:
RAP2 Locus: Os01g0102800 Mimulus guttatus: mgf009979m
RAP3 Locus: Os01g0102800 Populus trichocarpa: POPTR_0005s24820.1
Ricinus communis: 28492.m000483
Vitis vinifera: GSVIVP00028565001
Sequence Quality Mutant Information
TE-related: TE_related NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL524478;CL524477;CL517450
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: ACEC05;ANLF09
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: B02272;B08150;C08572
Postech T-DNA KO Line: 1B-21006;1C-03214;1D-03214