LOC_Os09g27950.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os09g27950.1 Brachypodium distachyon: Bradi4g31890.1
MSU V7 Locus: LOC_Os09g27950 Panicum virgatum:
CAZy Family: GT31 Sorghum bicolor: Sb02g026360
Chromosome: Chr9 Zea mays: GRMZM2G133613_P01
5' End: 16983978 Arabidopsis thaliana: AT1G22015.1;AT1G77810.1;AT1G77810.2
3' End: 16979991 Cucumis sativus: Cucsa.274640.1;Cucsa.274640.2;Cucsa.274640.3;Cucsa.274640.4;Cucsa.274640.5;Cucsa.274640.6
Alternative Splice Products: Glycine max: Glyma04g43340.1;Glyma06g11330.1;Glyma13g02420.1;Glyma14g33700.1
Putative Function: galactosyltransferase, putative, expressed Medicago truncatula:
RAP2 Locus: Os09g0452900 Mimulus guttatus: mgf005150m;mgf011377m
RAP3 Locus: Os09g0452900 Populus trichocarpa: POPTR_0002s09040.1;POPTR_0005s16310.1
Ricinus communis: 29908.m005951
Vitis vinifera: GSVIVP00015310001;GSVIVP00019231001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AB157872;AG214197;AG212400;AG209087;AG025286
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: NF7801_0_502_1A;T06546T;T13044T;T15902T;T30263T
PASA Status: PASA_validated OTL Tos17 FST: CU319461;CU316157;CU318335;CU315296;CU325250;CU320027;CU319927;ER893712;ER893328
Topology OTL Tos17 KO Line: AFGD05;AFHE04;AGRB03;AOFH05;AQFD11;AQRG12;ASMG06;ATHG03;AUIF12
Transmembrane Domain (TM): 0 UCD Ds FST: DU133554
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line: RGT3018_5.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Mitochondrion OTL T-DNA KO Line:
Arabidopsis Golgi Orthologs: AT1G77810.1 RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: CZ554017
TRIM T-DNA KO Line: M0017551
Postech T-DNA FST: A23908;A30591;A23909;A24458;A24459;A14274;C00917;D02695;D02696;D02680
Postech T-DNA KO Line: 1A-09239;2D-10561;2D-10572;3A-05935;3A-14690;3A-15147;3A-52241